National Institute for Physiological Sciences Takemura Lab Sensory & Cognitive Brain Mapping
National Institutes of Natural Sciences National Institute for Physiological SciencesNational Institutes of Natural Sciences National Institute for Physiological Sciences

Publications

Journal Articles


  1. Miyata, T., Fukunaga, M., Luo, J., Yokoi, I., Yamamoto, T., Yoshioka, A., Yang, J., Morita, T. & Takemura, H. (2026) Characteristics of cross-modal negative BOLD responses in the human sensory subcortex and cortex. Journal of Neurophysiology, in press.

    Pub Med Link Data/Code
  2. Taguma, D., Ogawa, S. & Takemura, H. (2025) Evaluating the impact of denoising diffusion MRI data on tractometry metrics of optic tract abnormalities in glaucoma. Scientific Reports, 15, 25812.

    PDF Pub Med Link Data/Code
  3. Nakayama, R., Uetsuki, M., Maruya, K. & Takemura, H. (2024) Evaluating correlations between reading ability and psychophysical measurements of dynamic visual information processing in Japanese adults. Scientific Reports, 14, 29546.

    PDF Pub Med Link Data/Code
  4. Luo, J., Yokoi, I., Dumoulin, S.O. & Takemura, H. (2024) Bistable perception of symbolic numbers. Journal of Vision, 24, 12.

    PDF Pub Med Link Data/Code
  5. Takemura, H., Kaneko, T., Sherwood, C.C., Johnson, G.A., Axer, M., Hecht, E.E., Ye, F.Q. & Leopold, D.A. (2024) A prominent vertical occipital white matter fasciculus unique to primate brains. Current Biology, 34, 3632-3643.

    Pub Med Link Data/Code
  6. Takemura, H., Kruper, J.A., Miyata, T. & Rokem, A. (2024) Tractometry of human visual white matter pathways in health and disease. Magnetic Resonance in Medical Sciences, 23, 316-340.

    PDF Pub Med Link Data/Code
  7. Uesaki, M., Furlan, M., Smith, A.T. & Takemura, H. (2024) White matter tracts adjacent to the human cingulate sulcus visual area (CSv). PLoS ONE, 19, e0300575.

    PDF Pub Med Link Data/Code
  8. Takemura, H., Liu, W., Kuribayashi, H., Miyata, T. & Kida, I. (2023) Evaluation of simultaneous multi-slice readout-segmented diffusion-weighted MRI acquisition in human brain optic nerve measurements. Magnetic Resonance Imaging, 102, 103-114.

    PDF Pub Med Link
  9. Morita, T., Takemura, H. & Naito, E. (2023) Functional and Structural Properties of Interhemispheric Interaction between Bilateral Precentral Hand Motor Regions in a Top Wheelchair Racing Paralympian. Brain Sciences, 13, 715.

    PDF Pub Med Link
  10. Oishi, H., Takemura, H. & Amano, K. (2023) Macromolecular tissue volume mapping of lateral geniculate nucleus subdivisions in living human brains. NeuroImage, 265, 119777.

    PDF Pub Med Link Data/Code
  11. Miyata, T., Benson, N.C., Winawer, J. & Takemura, H. (2022) Structural covariance and heritability of the optic tract and primary visual cortex in living human brains. The Journal of Neuroscience, 42, 6761-6769.

    Pub Med Link Data/Code
  12. Morita, T., Hirose, S., Kimura, N., Takemura, H., Asada, M. & Naito, E. (2022) Hyper-adaptation in the Human Brain: Functional and structural changes in the foot section of the primary motor cortex in a top wheelchair racing Paralympian. Frontiers in Systems Neuroscience, 16, 780652.

    PDF Pub Med Link
  13. Ogawa, S.*, Takemura, H.*, Horiguchi, H., Miyazaki, A., Matsumoto, K., Masuda, Y., Yoshikawa, K. & Nakano, T. (2022) Multi-contrast magnetic resonance imaging of visual white matter pathways in patients with glaucoma. Investigative Ophthalmology & Visual Science, 63, 29. (*: equal contribution)

    PDF Pub Med Link Data/Code
  14. Amemiya, K., Naito, E. & Takemura, H. (2021) Age dependency and lateralization in the three branches of the human superior longitudinal fasciculus. Cortex, 139, 116-133.

    PDF Pub Med Link Data/Code
  15. Masuda, Y., Takemura, H., Terao, M., Miyazaki, A., Ogawa, S., Horiguchi, H., Nakadomari, S., Matsumoto, K., Nakano, T., Wandell, B.A. & Amano, K. (2021) V1 projection zone signals in human macular degeneration depend on task despite absence of visual stimulus. Current Biology, 31(2), 406-412.

    Pub Med Link
  16. Takemura, H.*, Palomero-Gallagher, N.*, Axer, M., Gräßel, D., Jorgensen, M.J., Woods, R. & Zilles, K.* (2020) Anatomy of nerve fiber bundles at micrometer-resolution in the vervet monkey visual system. eLife, 9, e55444. (*: equal contributions)

    PDF Pub Med Link Data/Code
  17. Takemura, H., Yuasa, K. & Amano, K. (2020) Predicting neural response latency of the human early visual cortex from MRI-based tissue measurements of the optic radiation. eNeuro, 7(4), ENEURO.0545-19.2020. 1-18.

    PDF Pub Med Link Data/Code
  18. Kaneko, T.*, Takemura, H.*, Pestilli, F., Silva, A.C., Ye, F.Q. & Leopold, D.A. (2020) Spatial organization of occipital white matter tracts in the common marmoset. Brain Structure and Function, 225(4), 1313-1326. (*: equal contributions)

    Pub Med Link
  19. Minami, S., Oishi, H., Takemura, H. & Amano, K. (2020) Inter-individual differences in occipital alpha oscillations correlate with white matter tissue properties of the optic radiation. eNeuro, 7(2), ENEURO.0224-19.2020 1-11.

    PDF Pub Med Link
  20. Bullock, D., Takemura, H., Caiafa, C.F., Kitchell, L., McPherson, B., Caron, B. & Pestilli, F. (2019) Associative white matter connecting the dorsal and ventral posterior human cortex. Brain Structure and Function, 224(8), 2631-2660.

    Pub Med Link Data/Code
  21. Takemura, H.*, Ogawa, S.*, Mezer, A.A., Horiguchi, H., Miyazaki, A., Matsumoto, K., Shikishima, K., Nakano, T. & Masuda, Y. (2019) Diffusivity and quantitative T1 profile of human visual white matter tracts after retinal ganglion cell damage. NeuroImage: Clinical, 23, 101826. (*: equal contributions)

    PDF Pub Med Link Data/Code
  22. Takemura, H., Pestilli, F. & Weiner, K.S. (2019) Comparative neuroanatomy: integrating classic and modern methods to understand association fibers connecting dorsal and ventral visual cortex. Neuroscience Research, 146, 1-12.

    PDF Pub Med Link
  23. Oishi, H.*, Takemura, H.*, Aoki, S.C., Fujita, I. & Amano, K. (2018) Microstructural properties of the vertical occipital fasciculus explain the variability in human stereoacuity. Proceedings of the National Academy of Sciences of the United States of America, 115(48), 12289-12294. (*: equal contributions)

    Pub Med Link Data/Code
  24. Uesaki, M., Takemura, H. & Ashida, H. (2018) Computational neuroanatomy of human stratum proprium of interparietal sulcus. Brain Structure and Function, 223(1), 489-507.

    PDF Pub Med Link Data/Code
  25. Takemura, H., Pestilli, F., Weiner, K.S., Keliris, G.A., Landi, S., Sliwa, J., Ye, F.Q., Barnett, M., Leopold, D.A., Freiwald, W.A., Logothetis, N.K. & Wandell, B.A. (2017) Occipital white matter tracts in human and macaque. Cerebral Cortex, 27(6), 3346-3359.

    Pub Med Link
  26. Rokem, A., Takemura, H., Bock, A., Scherf, K. S., Behrmann, M., Wandell, B., Fine, I., Bridge, H. & Pestilli, F. (2017) The visual white matter: The application of diffusion MRI and fiber tractography to vision science. Journal of Vision, 17(2):4, 1-30.

    PDF Pub Med Link
  27. Takemura, H., Caiafa, C.F., Wandell, B.A. & Pestilli, F. (2016) Ensemble Tractography. PLoS Computational Biology, 12(2), e1004692.

    PDF Pub Med Link Data/Code
  28. Takemura, H., Rokem, A., Winawer, J., Yeatman, J. D., Wandell, B. A. & Pestilli, F. (2016) A major human white-matter pathway between dorsal and ventral visual cortex. Cerebral Cortex, 26(5), 2205-2214.

    Pub Med Link Data/Code
  29. Ogawa, S., Takemura, H., Horiguchi, H., Terao, M., Haji, T., Pestilli, F., Yeatman, J.D., Tsuneoka, H., Wandell, B.A. & Masuda, Y. (2014) White matter consequences of retinal receptor and ganglion cell damage. Investigative Ophthalmology & Visual Science, 55(10), 6976-6986.

    Pub Med Link
  30. Takemura, H., Ashida, H., Amano, K., Kitaoka, A. & Murakami, I. (2012) Neural correlates of induced motion perception in the human brain. The Journal of Neuroscience, 32(41), 14344-14354.

    PDF Pub Med Link
  31. Takemura, H., Tajima, S. & Murakami, I. (2011) Whether dots moving in two directions appear coherent or transparent depends on directional biases induced by surrounding motion. Journal of Vision, 11(14):17, 1-17.

    PDF Pub Med Link
  32. Takemura, H., Samejima, K., Vogels, R., Sakagami, M. & Okuda, J. (2011) Stimulus-dependent adjustment of reward prediction error in the midbrain. PLoS ONE, 6(12), e28337.

    PDF Pub Med Link
  33. Takemura, H. & Murakami, I. (2010) Visual motion detection sensitivity is enhanced by an orthogonal motion aftereffect. Journal of Vision, 10(11):7, 1-12.

    PDF Pub Med Link
  34. Tajima, S., Takemura, H., Murakami, I. & Okada, M. (2010) Neuronal population decoding explains the change in signal detection sensitivity caused by task-irrelevant perceptual bias. Neural Computation, 22(10), 2586-2614.

    Pub Med Link
  35. Takemura, H. & Murakami, I. (2010) Visual motion detection sensitivity is enhanced by orthogonal induced motion. Journal of Vision, 10(2):9, 1-13.

    PDF Pub Med Link